PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01033.1.p
Common NameLOC105972404, MIMGU_mgv1a026942mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 377aa    MW: 42607.3 Da    PI: 4.3658
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01033.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix431.2e-13141220286
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       Wt++e+ +L++   e+  + +r++l+   W+evs+k+ +e ++er+ +qC+++++ l+k+ykk+k   ++      s+++yf++++
  Migut.D01033.1.p 141 WTEHETFTLLDSWGERYLKQGRKSLRSEEWQEVSEKVsQESKLERTDTQCRNRLDTLKKKYKKEKSKPNS------SEWVYFKKID 220
                       *************************************88999**********************998886......68*****997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.0E-20140222No hitNo description
PROSITE profilePS500906.156141198IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.606.8E-4141205IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MMNDDEDDAS YHANTYSVNS QKFPIENPDY DDDDDSDDDD VDDDDKGIVV IEQDDDDEDD  60
DDEGNGIQRI GKDDYECGDV DEDENEGVNS TDLHKHPKKR KLKTLLPSYE FAPRAPPVPP  120
PPPAPKPPAS YGGGRNPLTD WTEHETFTLL DSWGERYLKQ GRKSLRSEEW QEVSEKVSQE  180
SKLERTDTQC RNRLDTLKKK YKKEKSKPNS SEWVYFKKID SLLSTPPPPN QTALSCGVDS  240
GEYVFTNPRA YLNRSNGFDE MRDSPGNSGS AEGGGNESEG LPPKRARNGR VKNSGGGGSF  300
KILADSFQKF SKIYEKIEDS KRKQMVELEK MRMDFHRDLE MQKRQILERA QAEIAKIWQG  360
DDDDEENTVS AENVSG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100KHPKKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852810.10.0PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A022Q7K90.0A0A022Q7K9_ERYGU; Uncharacterized protein
STRINGPGSC0003DMT4000805931e-129(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72302431
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-63Trihelix family protein